STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3DI00_TETNGEcdysoneless homolog (Drosophila). (637 aa)    
Predicted Functional Partners:
H3DKI5_TETNG
AAR2 splicing factor.
    
 
 0.937
H3CFC6_TETNG
Small nuclear ribonucleoprotein 200 (U5).
   
 
 0.897
H3CCS4_TETNG
Pre-mRNA processing factor 8.
    
 
 0.879
H3CIF0_TETNG
Elongation factor Tu GTP binding domain containing 2.
   
 
 0.604
H3CHL6_TETNG
Activating signal cointegrator 1 complex subunit 3.
   
 
 0.587
H3CNC9_TETNG
Helicase for meiosis 1.
   
 
 0.583
H3CAY8_TETNG
E2f-associated phosphoprotein.
    
   0.572
H3CR35_TETNG
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
      
 0.561
H3DHW0_TETNG
Small nuclear ribonucleoprotein 40 (U5).
    
 
 0.535
H3CNM9_TETNG
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
  
 0.531
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.