STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3DIU8_TETNGTranscription factor SOX. (357 aa)    
Predicted Functional Partners:
Q4RK86_TETNG
Chromosome 4 SCAF15031, whole genome shotgun sequence.
    
 0.618
H3D1P1_TETNG
Leucine rich repeat transmembrane neuronal 4 like 2.
      
 0.592
H3DF88_TETNG
Transcription factor 7.
    
0.543
H3DKZ0_TETNG
Lymphoid enhancer-binding factor 1.
    
0.538
H3DP39_TETNG
Catenin (cadherin-associated protein), beta 1.
    
 0.496
H3C7A1_TETNG
Homeobox C6a.
   
 
 0.494
H3C7N8_TETNG
HMG box domain-containing protein.
    
0.443
H3CZQ6_TETNG
Early growth response 3.
    
 0.440
H3CHC8_TETNG
Pleiomorphic adenoma gene-like 2.
    
 0.439
H3BXZ9_TETNG
Uncharacterized protein.
    
 0.420
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.