STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3DJ38_TETNGTransmembrane p24 trafficking protein 8. (261 aa)    
Predicted Functional Partners:
H3CEW9_TETNG
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
  
 
 0.884
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
  
 
 0.884
H3D402_TETNG
Trans-L-3-hydroxyproline dehydratase.
    
 0.843
H3DQ20_TETNG
Ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.677
H3C5P4_TETNG
Cytochrome b5 reductase 4.
  
  
 0.507
H3CBJ8_TETNG
FAD-binding FR-type domain-containing protein.
  
  
 0.507
THNSL1
Threonine synthase like 1.
  
  
 0.457
ASS1
Argininosuccinate synthase 1.
     
 0.451
H3D0R6_TETNG
N-acetylglutamate synthase.
     
 0.451
H3D1Q6_TETNG
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
     
 0.447
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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