STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q4RL26_TETNGChromosome undetermined SCAF15024, whole genome shotgun sequence. (127 aa)    
Predicted Functional Partners:
FABP7
Chromosome undetermined SCAF7757, whole genome shotgun sequence; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
   
 
 0.967
Q4S6K4_TETNG
Chromosome undetermined SCAF14725, whole genome shotgun sequence; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
     
 0.964
H3DHV8_TETNG
Fatty acid binding protein 3, muscle and heart; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
   
 
 0.952
H3DK87_TETNG
Fatty acid binding protein 11a; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
   
 
 0.939
H3DIL0_TETNG
Fatty acid binding protein 7, brain, a; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
   
 
 0.924
H3C222_TETNG
Fatty acid binding protein 1b, tandem duplicate 1.
     
0.919
FABP6
Fatty acid binding protein 6.
  
  
0.907
H3CCV2_TETNG
Nuclear receptor subfamily 1, group H, member 5.
   
 0.599
H3CEZ4_TETNG
Nuclear receptor subfamily 1, group H, member 5.
   
 0.599
H3D3M0_TETNG
Nuclear receptor subfamily 1, group H, member 4.
   
 0.599
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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