STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3DJX9_TETNGF-box and leucine-rich repeat protein 5. (694 aa)    
Predicted Functional Partners:
Q4T9N8_TETNG
Chromosome undetermined SCAF7519, whole genome shotgun sequence; Belongs to the SKP1 family.
    
 0.995
H3CI89_TETNG
Aconitase 1, soluble; Belongs to the aconitase/IPM isomerase family.
    
 0.917
H3CSQ2_TETNG
Aconitase domain-containing protein.
    
 0.917
H3D5X8_TETNG
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
    
 0.819
H3CA40_TETNG
Cullin 1b; Belongs to the cullin family.
    
 0.735
CUL3
Chromosome undetermined SCAF9338, whole genome shotgun sequence; Belongs to the cullin family.
    
 0.701
Q4T3H7_TETNG
Chromosome undetermined SCAF10063, whole genome shotgun sequence; Belongs to the cullin family.
    
 0.701
H3CIA0_TETNG
Cullin domain-containing protein; Belongs to the cullin family.
    
 0.701
Q4SX51_TETNG
Chromosome undetermined SCAF13005, whole genome shotgun sequence; Belongs to the cullin family.
    
 0.701
H3DCU8_TETNG
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.701
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.