Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
H3CBD4_TETNG | H3CY95_TETNG | ENSTNIP00000005556 | ENSTNIP00000013230 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 27; Belongs to the DEAD box helicase family. | Pumilio RNA-binding family member 3. | 0.948 |
H3CBD4_TETNG | H3D5W5_TETNG | ENSTNIP00000005556 | ENSTNIP00000015905 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 27; Belongs to the DEAD box helicase family. | Ribosomal L1 domain containing 1. | 0.873 |
H3CBD4_TETNG | H3DCH0_TETNG | ENSTNIP00000005556 | ENSTNIP00000018213 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 27; Belongs to the DEAD box helicase family. | NOC2-like nucleolar associated transcriptional repressor. | 0.964 |
H3CBD4_TETNG | H3DGH8_TETNG | ENSTNIP00000005556 | ENSTNIP00000019622 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 27; Belongs to the DEAD box helicase family. | Ribosomal RNA processing 12 homolog. | 0.800 |
H3CBD4_TETNG | H3DJ12_TETNG | ENSTNIP00000005556 | ENSTNIP00000020506 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 27; Belongs to the DEAD box helicase family. | DEAD (Asp-Glu-Ala-Asp) box helicase 24; Belongs to the DEAD box helicase family. | 0.880 |
H3CBD4_TETNG | H3DKE3_TETNG | ENSTNIP00000005556 | ENSTNIP00000020989 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 27; Belongs to the DEAD box helicase family. | Nucleolar protein interacting with the FHA domain of MKI67. | 0.987 |
H3CBD4_TETNG | H3DKS7_TETNG | ENSTNIP00000005556 | ENSTNIP00000021124 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 27; Belongs to the DEAD box helicase family. | RNA binding motif protein 28. | 0.992 |
H3CBD4_TETNG | H3DL59_TETNG | ENSTNIP00000005556 | ENSTNIP00000021257 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 27; Belongs to the DEAD box helicase family. | EBNA1 binding protein 2. | 0.958 |
H3CBD4_TETNG | PES1 | ENSTNIP00000005556 | ENSTNIP00000018983 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 27; Belongs to the DEAD box helicase family. | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.993 |
H3CBD4_TETNG | Q4SNJ7_TETNG | ENSTNIP00000005556 | ENSTNIP00000010814 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 27; Belongs to the DEAD box helicase family. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.932 |
H3CY95_TETNG | H3CBD4_TETNG | ENSTNIP00000013230 | ENSTNIP00000005556 | Pumilio RNA-binding family member 3. | DEAD (Asp-Glu-Ala-Asp) box polypeptide 27; Belongs to the DEAD box helicase family. | 0.948 |
H3CY95_TETNG | H3D5W5_TETNG | ENSTNIP00000013230 | ENSTNIP00000015905 | Pumilio RNA-binding family member 3. | Ribosomal L1 domain containing 1. | 0.974 |
H3CY95_TETNG | H3DCH0_TETNG | ENSTNIP00000013230 | ENSTNIP00000018213 | Pumilio RNA-binding family member 3. | NOC2-like nucleolar associated transcriptional repressor. | 0.965 |
H3CY95_TETNG | H3DGH8_TETNG | ENSTNIP00000013230 | ENSTNIP00000019622 | Pumilio RNA-binding family member 3. | Ribosomal RNA processing 12 homolog. | 0.905 |
H3CY95_TETNG | H3DJ12_TETNG | ENSTNIP00000013230 | ENSTNIP00000020506 | Pumilio RNA-binding family member 3. | DEAD (Asp-Glu-Ala-Asp) box helicase 24; Belongs to the DEAD box helicase family. | 0.971 |
H3CY95_TETNG | H3DKE3_TETNG | ENSTNIP00000013230 | ENSTNIP00000020989 | Pumilio RNA-binding family member 3. | Nucleolar protein interacting with the FHA domain of MKI67. | 0.980 |
H3CY95_TETNG | H3DKS7_TETNG | ENSTNIP00000013230 | ENSTNIP00000021124 | Pumilio RNA-binding family member 3. | RNA binding motif protein 28. | 0.987 |
H3CY95_TETNG | H3DL59_TETNG | ENSTNIP00000013230 | ENSTNIP00000021257 | Pumilio RNA-binding family member 3. | EBNA1 binding protein 2. | 0.985 |
H3CY95_TETNG | PES1 | ENSTNIP00000013230 | ENSTNIP00000018983 | Pumilio RNA-binding family member 3. | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.939 |
H3CY95_TETNG | Q4SNJ7_TETNG | ENSTNIP00000013230 | ENSTNIP00000010814 | Pumilio RNA-binding family member 3. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.992 |
page 1 of 6