STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3DMR9_TETNGCharged multivesicular body protein 5a. (204 aa)    
Predicted Functional Partners:
Q4SFE2_TETNG
Chromosome 2 SCAF14604, whole genome shotgun sequence.
   
 0.995
Q4SKA3_TETNG
Chromosome 13 SCAF14566, whole genome shotgun sequence.
   
 0.993
H3DJ03_TETNG
Uncharacterized protein.
   
 0.989
H3CJZ3_TETNG
Charged multivesicular body protein 4C.
   
0.982
H3CM66_TETNG
Uncharacterized protein.
   
0.982
H3CWP7_TETNG
Charged multivesicular body protein 6a.
   
 0.966
H3D2V3_TETNG
Charged multivesicular body protein 6.
   
 0.966
Q4RQV3_TETNG
Chromosome 2 SCAF15004, whole genome shotgun sequence.
   
 0.964
H3CF68_TETNG
IST1 factor associated with ESCRT-III.
    
 
 0.931
MLKL
Mixed lineage kinase domain like pseudokinase.
    
  0.900
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.