STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM38BTransmembrane protein 38B. (316 aa)    
Predicted Functional Partners:
H3DMX3_TETNG
Uncharacterized protein.
      
 0.597
H3D7Y2_TETNG
Membrane-bound transcription factor peptidase, site 2.
      
 0.560
H3D180_TETNG
SEC24 homolog D, COPII coat complex component.
      
 0.558
H3DHU9_TETNG
Cartilage associated protein.
      
 0.550
H3CPK8_TETNG
Prolyl 3-hydroxylase 1.
      
 0.547
Q4SU55_TETNG
Peptidylprolyl isomerase.
      
 0.546
H3CF49_TETNG
BZIP domain-containing protein.
      
 0.514
Q4SLU8_TETNG
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
      
 0.489
H3CJF8_TETNG
Interferon induced transmembrane protein 5.
      
 0.475
FKBP10
Peptidylprolyl isomerase.
      
 0.472
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.