STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3DNS4_TETNGSpectrin beta chain; Belongs to the spectrin family. (2496 aa)    
Predicted Functional Partners:
H3CBU0_TETNG
Spectrin alpha, non-erythrocytic 1.
   
0.877
H3DFV8_TETNG
Intersectin 2a.
     
 0.616
H3DK01_TETNG
Uncharacterized protein.
     
 0.616
H3CVG4_TETNG
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.496
H3CI87_TETNG
Uncharacterized protein.
   
 0.493
H3CIC6_TETNG
Ankyrin 1, erythrocytic b.
   
 0.493
H3DA91_TETNG
Uncharacterized protein.
   
 0.493
H3DEI8_TETNG
Ankyrin 1, erythrocytic a.
   
 0.493
H3DKB8_TETNG
Ankyrin 2a, neuronal.
   
 0.493
H3DQ55_TETNG
Ankyrin 3a.
   
 0.493
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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