STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3DP39_TETNGCatenin (cadherin-associated protein), beta 1. (781 aa)    
Predicted Functional Partners:
Q4RVP4_TETNG
Chromosome 9 SCAF14991, whole genome shotgun sequence.
    
 0.997
H3DKZ0_TETNG
Lymphoid enhancer-binding factor 1.
    
 0.996
H3CFQ6_TETNG
Casein kinase 1, alpha 1.
   
 0.995
Q4RXV2_TETNG
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
   
 0.989
Q4T9N8_TETNG
Chromosome undetermined SCAF7519, whole genome shotgun sequence; Belongs to the SKP1 family.
   
 0.980
H3C4L0_TETNG
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
   
 0.979
H3CD58_TETNG
C2H2-type domain-containing protein; Cadherins are calcium-dependent cell adhesion proteins.
   
 0.979
H3C1Z0_TETNG
Catenin, beta interacting protein 1.
    
 0.973
H3D8V3_TETNG
BCL9 transcription coactivator.
    
 0.973
H3CCP6_TETNG
F-box and WD repeat domain containing 11b.
    
 0.968
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.