STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHATCarn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family. (627 aa)    
Predicted Functional Partners:
H3CNC1_TETNG
Sterol carrier protein 2a; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.817
Q4T6G9_TETNG
Chromosome undetermined SCAF8763, whole genome shotgun sequence.
   
  
 0.765
H3C6B1_TETNG
Hydroxysteroid dehydrogenase like 2.
   
 0.731
H3CMZ1_TETNG
Si:dkey-150i13.2; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.608
H3DB03_TETNG
Solute carrier family 25 member 20; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.608
cs
Citrate synthase, mitochondrial.
   
 
 0.595
H3BZB4_TETNG
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.593
H3DJG2_TETNG
Acyl-CoA oxidase 1, palmitoyl.
   
 0.593
H3DH09_TETNG
Hydroxysteroid (17-beta) dehydrogenase 4.
   
 0.588
H3CSM0_TETNG
Stomatin (EPB72)-like 1.
   
 0.579
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.