STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3DQD0_TETNGCholinergic receptor, nicotinic, alpha 2b (neuronal). (461 aa)    
Predicted Functional Partners:
H3CWV3_TETNG
Cholinergic receptor, nicotinic, alpha 1 (muscle).
  
0.628
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
  
0.626
H3BVY7_TETNG
Cholinergic receptor, nicotinic, alpha 5.
  
0.579
H3C655_TETNG
Cholinergic receptor, nicotinic, beta 3b (neuronal).
  
0.576
H3D3B1_TETNG
Cholinergic receptor, nicotinic, beta polypeptide 3a.
  
0.575
CHRNB3
Cholinergic receptor nicotinic beta 3 subunit.
  
0.575
H3CL53_TETNG
Protein kinase domain-containing protein.
      
 0.546
H3CK45_TETNG
Cholinergic receptor, nicotinic, beta 1 (muscle).
  
 
0.520
H3CK46_TETNG
Cholinergic receptor, nicotinic, beta 1 (muscle) like.
  
 
0.517
H3D3B3_TETNG
Cholinergic receptor, nicotinic, beta 5a.
  
 
0.516
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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