STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GME_08464Twin-arginine translocation pathway signal; COG3211 Predicted phosphatase. (600 aa)    
Predicted Functional Partners:
GME_08469
Twin-arginine translocation pathway signal; COG3211 Predicted phosphatase.
     0.980
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
   
 
  0.652
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.583
GME_08474
COG4256 Hemin uptake protein.
       0.448
GME_12783
Hypothetical protein.
  
     0.423
GME_05215
COG0584 Glycerophosphoryl diester phosphodiesterase.
   
 
  0.413
GME_04642
Damage-inducible protein CinA; COG1546 Uncharacterized protein (competence- and mitomycin-induced); Belongs to the CinA family.
   
 
  0.400
phnC
ABC transporter ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
   
    0.400
phnC-2
Phosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
   
    0.400
Your Current Organism:
Halomonas sp. TD01
NCBI taxonomy Id: 999141
Other names: H. sp. TD01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.