STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GME_16837Hydroxyglutarate oxidase; COG0579 Predicted dehydrogenase. (404 aa)    
Predicted Functional Partners:
GME_16842
Carbon starvation induced protein.
 
 
 0.992
gltB
COG0067 Glutamate synthase domain 1.
  
 
 0.961
GME_16172
Fumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.886
GME_14048
NADH dehydrogenase (quinone); COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit.
     
 0.845
GME_04682
COG5016 Pyruvate/oxaloacetate carboxyltransferase.
 
  
  0.818
GME_12227
COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain; Belongs to the PEP-utilizing enzyme family.
  
 
 0.818
GME_06350
COG2190 Phosphotransferase system IIA components; Belongs to the PEP-utilizing enzyme family.
    
 0.807
GME_05385
Nitrate reductase, subunit alpha; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
     
 0.796
GME_06260
COG0372 Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.753
GME_07291
COG0372 Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.753
Your Current Organism:
Halomonas sp. TD01
NCBI taxonomy Id: 999141
Other names: H. sp. TD01
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.