Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GME_05680 | GME_17803 | GME_05680 | GME_17803 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | GCN5-related N-acetyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. | 0.605 |
GME_05680 | ectC | GME_05680 | GME_16007 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | L-ectoine synthase; Catalyzes the circularization of gamma-N-acetyl-alpha,gamma- diaminobutyric acid (ADABA) to ectoine (1,4,5,6-tetrahydro-2-methyl-4- pyrimidine carboxylic acid), which is an excellent osmoprotectant. | 0.511 |
GME_10816 | GME_11487 | GME_10816 | GME_11487 | Adenylate/guanylate cyclase; COG3629 DNA-binding transcriptional activator of the SARP family. | Diguanylate cyclase; COG2199 FOG: GGDEF domain. | 0.770 |
GME_10816 | GME_16267 | GME_10816 | GME_16267 | Adenylate/guanylate cyclase; COG3629 DNA-binding transcriptional activator of the SARP family. | Hypothetical protein. | 0.764 |
GME_10816 | GME_17803 | GME_10816 | GME_17803 | Adenylate/guanylate cyclase; COG3629 DNA-binding transcriptional activator of the SARP family. | GCN5-related N-acetyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. | 0.663 |
GME_10816 | GME_19032 | GME_10816 | GME_19032 | Adenylate/guanylate cyclase; COG3629 DNA-binding transcriptional activator of the SARP family. | Hypothetical protein. | 0.765 |
GME_11487 | GME_10816 | GME_11487 | GME_10816 | Diguanylate cyclase; COG2199 FOG: GGDEF domain. | Adenylate/guanylate cyclase; COG3629 DNA-binding transcriptional activator of the SARP family. | 0.770 |
GME_11487 | GME_16267 | GME_11487 | GME_16267 | Diguanylate cyclase; COG2199 FOG: GGDEF domain. | Hypothetical protein. | 0.756 |
GME_11487 | GME_17803 | GME_11487 | GME_17803 | Diguanylate cyclase; COG2199 FOG: GGDEF domain. | GCN5-related N-acetyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. | 0.608 |
GME_11487 | GME_19032 | GME_11487 | GME_19032 | Diguanylate cyclase; COG2199 FOG: GGDEF domain. | Hypothetical protein. | 0.688 |
GME_16267 | GME_10816 | GME_16267 | GME_10816 | Hypothetical protein. | Adenylate/guanylate cyclase; COG3629 DNA-binding transcriptional activator of the SARP family. | 0.764 |
GME_16267 | GME_11487 | GME_16267 | GME_11487 | Hypothetical protein. | Diguanylate cyclase; COG2199 FOG: GGDEF domain. | 0.756 |
GME_16267 | GME_17803 | GME_16267 | GME_17803 | Hypothetical protein. | GCN5-related N-acetyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. | 0.641 |
GME_16267 | GME_19032 | GME_16267 | GME_19032 | Hypothetical protein. | Hypothetical protein. | 0.750 |
GME_17803 | GME_05680 | GME_17803 | GME_05680 | GCN5-related N-acetyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.605 |
GME_17803 | GME_10816 | GME_17803 | GME_10816 | GCN5-related N-acetyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. | Adenylate/guanylate cyclase; COG3629 DNA-binding transcriptional activator of the SARP family. | 0.663 |
GME_17803 | GME_11487 | GME_17803 | GME_11487 | GCN5-related N-acetyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. | Diguanylate cyclase; COG2199 FOG: GGDEF domain. | 0.608 |
GME_17803 | GME_16267 | GME_17803 | GME_16267 | GCN5-related N-acetyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. | Hypothetical protein. | 0.641 |
GME_17803 | GME_17808 | GME_17803 | GME_17808 | GCN5-related N-acetyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. | Hypothetical protein. | 0.750 |
GME_17803 | GME_19032 | GME_17803 | GME_19032 | GCN5-related N-acetyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. | Hypothetical protein. | 0.597 |
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