STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GME_18013COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. (263 aa)    
Predicted Functional Partners:
GME_00315
COG0642 Signal transduction histidine kinase.
    
 0.962
GME_04127
COG0642 Signal transduction histidine kinase.
   
 0.962
GME_00050
Two-component sensor; COG0591 Na+/proline symporter.
   
 0.957
GME_00640
Multi-sensor hybrid histidine kinase; COG2203 FOG: GAF domain.
    
 0.956
GME_08784
Putative two-component sensor; COG0642 Signal transduction histidine kinase.
    
 0.956
GME_02870
COG3321 Polyketide synthase modules and related proteins.
  
 0.940
GME_18580
COG1960 Acyl-CoA dehydrogenases.
  
  0.907
GME_05960
COG1250 3-hydroxyacyl-CoA dehydrogenase.
 0.888
GME_09119
COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 
0.885
fadB
Multifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 0.862
Your Current Organism:
Halomonas sp. TD01
NCBI taxonomy Id: 999141
Other names: H. sp. TD01
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