STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GME_18278Hypothetical protein. (122 aa)    
Predicted Functional Partners:
GME_15977
HmsH protein; COG0457 FOG: TPR repeat.
  
     0.639
GME_18283
Entericidin EcnAB; COG5510 Predicted small secreted protein.
       0.592
GME_08439
Hypothetical protein.
  
     0.583
GME_15460
Hypothetical protein; COG3218 ABC-type uncharacterized transport system, auxiliary component.
  
     0.537
GME_18288
Hypothetical protein; COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases.
       0.458
GME_15470
ABC transporter permease; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
  
     0.442
GME_10576
COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily.
  
     0.428
GME_16052
Hypothetical protein.
  
     0.408
Your Current Organism:
Halomonas sp. TD01
NCBI taxonomy Id: 999141
Other names: H. sp. TD01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.