STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FB546_101730Unannotated protein. (324 aa)    
Predicted Functional Partners:
GCA_000204195_03951
Unannotated protein.
   
 
 0.798
FB546_101729
Unannotated protein.
 
 
 0.745
GCA_000204195_02687
Unannotated protein.
  
 
 0.680
FB546_101728
Unannotated protein.
 
 
 0.639
acpP
Unannotated protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 
 0.621
FB546_102368
Unannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.556
FB546_102366
Unannotated protein; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
 
 0.546
GCA_000204195_02672
Unannotated protein.
  
  
  0.539
GCA_000204195_02068
Unannotated protein.
  
 
 0.519
FB546_11756
Unannotated protein.
  
     0.517
Your Current Organism:
Acidovorax radicis
NCBI taxonomy Id: 999386
Other names: A. radicis N35, Acidovorax radicis N35, Acidovorax radicis str. N35, Acidovorax radicis strain N35, Acidovorax sp. N35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.