STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000204195_03167Unannotated protein. (391 aa)    
Predicted Functional Partners:
FB546_101669
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.754
FB546_102299
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.710
FB546_114106
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
  
 
  0.709
FB546_114105
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
  
 
  0.683
FB546_101444
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.681
FB546_102298
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
  
 
  0.646
FB546_114107
Unannotated protein.
  
 
  0.644
FB546_101445
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
  
 
  0.640
FB546_10414
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.615
FB546_114108
Unannotated protein.
  
 
  0.606
Your Current Organism:
Acidovorax radicis
NCBI taxonomy Id: 999386
Other names: A. radicis N35, Acidovorax radicis N35, Acidovorax radicis str. N35, Acidovorax radicis strain N35, Acidovorax sp. N35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.