STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FB546_11419Unannotated protein; Belongs to the peptidase S11 family. (366 aa)    
Predicted Functional Partners:
FB546_10655
Unannotated protein.
  
  
 0.703
leuA-2
Unannotated protein; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.
       0.582
mrdA
Unannotated protein; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.
 
 
 0.576
ftsI
Unannotated protein; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum.
 
 
 0.571
GCA_000204195_00797
Unannotated protein.
  
 
 0.563
FB546_10132
Unannotated protein.
  
  
 0.552
ftsW
Unannotated protein; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily.
 
   
 0.530
mtgA
Unannotated protein; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
  
 
 0.496
FB546_104434
Unannotated protein.
  
  
 0.490
FB546_104435
Unannotated protein.
  
  
 0.490
Your Current Organism:
Acidovorax radicis
NCBI taxonomy Id: 999386
Other names: A. radicis N35, Acidovorax radicis N35, Acidovorax radicis str. N35, Acidovorax radicis strain N35, Acidovorax sp. N35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.