STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACOT13acyl-CoA thioesterase 13. (134 aa)    
Predicted Functional Partners:
UBIAD1
UbiA prenyltransferase domain containing 1.
    
 0.942
LOC107135730
annotation not available
    
 0.938
ECHS1
enoyl-CoA hydratase, short chain 1.
  
 0.858
ECHDC1
ethylmalonyl-CoA decarboxylase 1.
  
 0.854
NQO2
N-ribosyldihydronicotinamide:quinone reductase 2.
  
 
 0.815
NQO1
NAD(P)H quinone dehydrogenase 1.
  
 
 0.811
PNP
Purine nucleoside phosphorylase.
    
  0.798
MTAP
Methylthioadenosine phosphorylase.
    
  0.798
ENSMMMP00000008721
annotation not available
   
 0.781
ENSMMMP00000011533
annotation not available
   
 0.781
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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