STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNCTenascin C. (2110 aa)    
Predicted Functional Partners:
VTN
Vitronectin.
    
 0.931
TNR
Tenascin R.
     
0.924
PLAU
Plasminogen activator, urokinase.
   
  0.924
TNN
Tenascin N.
     
0.919
ENSMMMP00000023015
annotation not available
   
 0.913
ENSMMMP00000023030
annotation not available
   
 0.913
CD40LG
CD40 ligand.
    
   0.899
ITGA9
Integrin subunit alpha 9.
    
 0.893
ITGAV
Integrin subunit alpha V.
    
 0.887
ITGA4
Integrin subunit alpha 4.
    
 0.886
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.