STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX3Peroxisomal biogenesis factor 3. (373 aa)    
Predicted Functional Partners:
PEX19
Peroxisomal biogenesis factor 19.
    
 0.999
PEX12
Peroxisomal biogenesis factor 12.
   
 0.986
PEX13
Peroxisomal biogenesis factor 13.
   
 0.982
ABCD3
ATP binding cassette subfamily D member 3.
   
 0.941
PEX16
Peroxisomal biogenesis factor 16.
    
 0.934
BIN1
Bridging integrator 1.
   
 0.931
APOA5
Apolipoprotein A5.
     
 0.922
ENSMMMP00000004209
annotation not available
   
 0.914
PEX11B
Peroxisomal biogenesis factor 11 beta.
   
 0.914
PEX14
Peroxisomal biogenesis factor 14.
   
 0.914
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.