STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXB1Homeobox B1. (302 aa)    
Predicted Functional Partners:
PBX1
PBX homeobox 1.
    
 0.963
PBX4
PBX homeobox 4.
    
 0.960
PBX3
PBX homeobox 3.
    
 0.911
PBX2
PBX homeobox 2.
    
 0.911
HOXA1
Homeobox A1.
   
0.872
PKNOX1
PBX/knotted 1 homeobox 1.
    
 0.797
PKNOX2
PBX/knotted 1 homeobox 2.
    
 0.765
MEIS3
Meis homeobox 3.
   
 0.673
ENSMMMP00000003903
annotation not available
    
 0.562
ENSMMMP00000013192
annotation not available
    
 0.562
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.