STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NID2Nidogen 2. (1412 aa)    
Predicted Functional Partners:
LAMC1
Laminin subunit gamma 1.
   
 0.928
AGRN
Agrin.
   
 0.904
LAMC3
Laminin subunit gamma 3.
   
 0.879
EGFLAM
EGF like, fibronectin type III and laminin G domains.
   
 0.799
LAMA4
Laminin subunit alpha 4.
   
 0.798
LAMC2
Laminin subunit gamma 2.
   
 0.770
CYB5R4
Cytochrome b5 reductase 4.
    
 0.768
LAMA2
Laminin subunit alpha 2.
   
 0.756
LAMB1
Laminin subunit beta 1.
   
 0.720
Lama3
annotation not available
   
 0.716
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.