STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HFEHomeostatic iron regulator. (330 aa)    
Predicted Functional Partners:
TFRC
Transferrin receptor.
    
 0.999
TFR2
Transferrin receptor 2.
    
 0.998
HJV
Hemojuvelin BMP co-receptor.
     
 0.993
EPO
Erythropoietin.
    
 0.976
RPA2
Replication protein A2.
    
 0.969
ENSMMMP00000008516
annotation not available
     
 0.911
RGMA
Repulsive guidance molecule BMP co-receptor a.
     
 0.911
HAMP
Hepcidin antimicrobial peptide.
   
  
 0.848
STN1
STN1 subunit of CST complex.
    
  0.718
SASS6
SAS-6 centriolar assembly protein.
    
  0.718
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.