STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMMP00000002002annotation not available (331 aa)    
Predicted Functional Partners:
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.989
ENSMMMP00000023761
annotation not available
   
 0.989
CDK1
Cyclin dependent kinase 1.
    
  0.977
CDK2
Cyclin dependent kinase 2.
    
  0.977
SPDYA
speedy/RINGO cell cycle regulator family member A.
     
  0.976
RPS16
Ribosomal protein S16.
  
 0.976
Rps3
annotation not available
  
 0.975
RPS9
Ribosomal protein S9.
  
 0.974
RPS8
Ribosomal protein S8.
   
 0.972
RPS21
Ribosomal protein S21.
   
 0.971
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.