STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HSPBP1HSPA (Hsp70) binding protein 1. (357 aa)    
Predicted Functional Partners:
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.999
ENSMMMP00000023761
annotation not available
   
 0.999
Rps3
annotation not available
  
 0.993
PDCD11
Programmed cell death 11.
  
 0.990
RPS8
Ribosomal protein S8.
   
 0.988
RPS10
Ribosomal protein S10.
   
 0.988
RPL11
Ribosomal protein L11.
  
 0.982
RPL13
Ribosomal protein L13.
   
 0.980
TUFM
Tu translation elongation factor, mitochondrial.
  
 0.980
MRPS9
Mitochondrial ribosomal protein S9.
  
 0.979
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.