Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNCBSynuclein beta. (134 aa)    
Predicted Functional Partners:
SNCA
Synuclein alpha.
   
 
 0.982
SNCG
Synuclein gamma.
   
 
 0.869
SNCAIP
Synuclein alpha interacting protein.
    
 
 0.713
NRSN2
Neurensin 2.
   
  
 0.665
CPLX1
Complexin 1.
   
  
 0.634
UNC5A
Unc-5 netrin receptor A.
   
  
 0.629
SYT1
Synaptotagmin 1.
   
  
 0.615
SLC30A9
Solute carrier family 30 member 9.
      
 0.565
TSTA3
Tissue specific transplantation antigen P35B.
      
 0.563
PLP1
Proteolipid protein 1.
   
  
 0.554
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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