Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EGFLAMEGF like, fibronectin type III and laminin G domains. (1014 aa)    
Predicted Functional Partners:
DAG1
Dystroglycan 1.
    
 0.969
TENM1
Teneurin transmembrane protein 1.
    
 0.863
ITGA10
Integrin subunit alpha 10.
    
 0.855
KATNAL2
Katanin catalytic subunit A1 like 2.
    
 
 0.844
LRIT3
Leucine rich repeat, Ig-like and transmembrane domains 3.
    
 0.823
TENM2
Teneurin transmembrane protein 2.
    
 0.810
TENM3
Teneurin transmembrane protein 3.
    
 0.810
KCNV2
Potassium voltage-gated channel modifier subfamily V member 2.
    
 
 0.779
TENM4
Teneurin transmembrane protein 4.
    
 0.770
ANKS1B
Ankyrin repeat and sterile alpha motif domain containing 1B.
    
 
 0.765
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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