STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMMP00000002157annotation not available (130 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.994
BARD1
BRCA1 associated RING domain 1.
    
 0.887
KDM6A
Lysine demethylase 6A.
    
 0.867
KDM6B
Lysine demethylase 6B.
    
 0.867
ENSMMMP00000028263
annotation not available
    
 0.867
EP300
E1A binding protein p300.
    
 0.866
ENSMMMP00000012855
annotation not available
   
 0.851
CENPA
Centromere protein A.
   
 0.851
ENSMMMP00000002623
annotation not available
 
 0.850
H2BC12
H2B clustered histone 12.
 
 0.850
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.