STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNNI3Troponin I3, cardiac type. (210 aa)    
Predicted Functional Partners:
TNNT2
Troponin T2, cardiac type.
   
 0.999
TNNC1
Troponin C1, slow skeletal and cardiac type.
   
 0.999
TNNT1
Troponin T1, slow skeletal type.
   
 0.994
TNNT3
Troponin T3, fast skeletal type.
   
 0.994
SMIM20
Small integral membrane protein 20.
   
 0.985
MYL1
Myosin light chain 1.
   
 0.980
ACTC1
Actin alpha cardiac muscle 1.
   
 0.968
ENSMMMP00000002440
annotation not available
   
 0.955
TPM2
Tropomyosin 2.
   
 0.951
GATD1
Glutamine amidotransferase like class 1 domain containing 1.
   
 0.929
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.