STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFYCNuclear transcription factor Y subunit gamma. (335 aa)    
Predicted Functional Partners:
NFYB
Nuclear transcription factor Y subunit beta.
   
 0.999
NFYA
Nuclear transcription factor Y subunit alpha.
    
 0.999
POLE3
DNA polymerase epsilon 3, accessory subunit.
    
 0.991
ING2
Inhibitor of growth family member 2.
    
 0.925
CEBPZ
CCAAT enhancer binding protein zeta.
     
 0.912
CIITA
Class II major histocompatibility complex transactivator.
     
 0.878
POLE
DNA polymerase epsilon, catalytic subunit.
    
 0.866
ATF2
Activating transcription factor 2.
     
 0.859
POLD1
DNA polymerase delta 1, catalytic subunit.
    
 0.840
REV3L
REV3 like, DNA directed polymerase zeta catalytic subunit.
    
 0.839
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.