STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERPINB5Serpin family B member 5. (376 aa)    
Predicted Functional Partners:
F2
Coagulation factor II, thrombin.
  
 0.764
VTN
Vitronectin.
   
 0.632
TG
Thyroglobulin.
    
 0.621
ALB
Albumin.
   
 0.581
F9
Coagulation factor IX.
  
  0.577
F10
Coagulation factor X.
  
  0.577
F7
Coagulation factor VII.
  
  0.577
PROC
Protein C, inactivator of coagulation factors Va and VIIIa.
  
 0.559
PKP1
Plakophilin 1.
   
  0.547
PLG
Plasminogen.
  
 0.542
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.