STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBXN1UBX domain protein 1. (297 aa)    
Predicted Functional Partners:
FAF2
Fas associated factor family member 2.
   
 0.999
VCP
Valosin containing protein.
    
 0.999
UBXN7
UBX domain protein 7.
   
 0.999
FAF1
Fas associated factor 1.
   
0.999
DERL1
Derlin 1.
    
 0.995
KATNAL2
Katanin catalytic subunit A1 like 2.
   
 0.993
BAG6
BCL2 associated athanogene 6.
    
 
 0.991
KCTD10
Potassium channel tetramerization domain containing 10.
    
 
 0.991
MAGED1
MAGE family member D1.
    
   0.990
BTBD9
BTB domain containing 9.
    
   0.990
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.