STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BANF2Barrier to autointegration factor 2. (90 aa)    
Predicted Functional Partners:
EMD
Emerin.
    
 0.958
LMNA
Lamin A/C.
   
 0.897
LMNB1
Lamin B1.
   
 0.864
LEMD3
LEM domain containing 3.
   
 0.863
LMNTD1
Lamin tail domain containing 1.
   
 0.820
VRK1
VRK serine/threonine kinase 1.
    
 0.798
GFAP
Glial fibrillary acidic protein.
    
 0.752
LMNTD2
Lamin tail domain containing 2.
    
 0.752
VRK2
VRK serine/threonine kinase 2.
    
 0.736
ENSMMMP00000014089
annotation not available
    
 0.736
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.