STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB21RAB21, member RAS oncogene family. (214 aa)    
Predicted Functional Partners:
Rabgef1
annotation not available
   
 0.994
ENSMMMP00000015596
annotation not available
   
 0.994
ENSMMMP00000015627
annotation not available
   
 0.994
ENSMMMP00000015637
annotation not available
   
 0.994
ANKRD27
Ankyrin repeat domain 27.
   
 0.897
CHM
CHM Rab escort protein.
    
 0.872
GAPVD1
GTPase activating protein and VPS9 domains 1.
   
 0.857
SBF2
SET binding factor 2.
    
 0.838
GDI1
GDP dissociation inhibitor 1.
   
 0.747
GDI2
GDP dissociation inhibitor 2.
   
 0.747
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.