Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PCMT1protein-L-isoaspartate (D-aspartate) O-methyltransferase. (211 aa)    
Predicted Functional Partners:
DHX15
DEAH-box helicase 15.
   
   0.897
AIMP2
Aminoacyl tRNA synthetase complex interacting multifunctional protein 2.
    
   0.868
RPIA
Ribose 5-phosphate isomerase A.
   
   0.855
TTC7B
Tetratricopeptide repeat domain 7B.
      
 0.851
DERA
Deoxyribose-phosphate aldolase.
    
   0.835
BAP1
BRCA1 associated protein 1.
   
   0.800
ALDH16A1
Aldehyde dehydrogenase 16 family member A1.
    
 
 0.798
SCYL2
SCY1 like pseudokinase 2.
    
   0.791
COX17
Cytochrome c oxidase copper chaperone COX17.
    
   0.789
YKT6
YKT6 v-SNARE homolog.
    
   0.778
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.