STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCMT1protein-L-isoaspartate (D-aspartate) O-methyltransferase. (211 aa)    
Predicted Functional Partners:
ENSMMMP00000005960
annotation not available
  
  
 0.606
ENSMMMP00000005815
annotation not available
   
  
 0.574
TTC7B
Tetratricopeptide repeat domain 7B.
      
 0.573
BORCS5
BLOC-1 related complex subunit 5.
      
 0.572
TMBIM6
Transmembrane BAX inhibitor motif containing 6.
      
 0.571
METTL6
Methyltransferase like 6.
      
 0.569
UHRF1
Ubiquitin like with PHD and ring finger domains 1.
      
 0.567
DHX15
DEAH-box helicase 15.
 
 
   0.508
ALDH16A1
Aldehyde dehydrogenase 16 family member A1.
    
 
 0.507
ENSMMMP00000010927
annotation not available
  
  
 0.503
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.