Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SUGP2SURP and G-patch domain containing 2. (1100 aa)    
Predicted Functional Partners:
ENSMMMP00000016383
annotation not available
    
 
 0.824
ENSMMMP00000021718
annotation not available
    
   0.824
TMEM126B
Transmembrane protein 126B.
    
   0.820
RBM17
RNA binding motif protein 17.
    
 
 0.818
U2AF2
U2 small nuclear RNA auxiliary factor 2.
    
 0.804
ZRANB1
Zinc finger RANBP2-type containing 1.
    
   0.796
TRIM28
Tripartite motif containing 28.
    
   0.796
GIN1
Gypsy retrotransposon integrase 1.
      
 0.741
Rad50
annotation not available
     
 0.692
LUC7L3
LUC7 like 3 pre-mRNA splicing factor.
   
 
 0.676
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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