STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUGP2SURP and G-patch domain containing 2. (1100 aa)    
Predicted Functional Partners:
RBM17
RNA binding motif protein 17.
    
 
 0.832
U2AF2
U2 small nuclear RNA auxiliary factor 2.
    
 
 0.806
DHX32
DEAH-box helicase 32 (putative).
    
 0.760
DQX1
DEAQ-box RNA dependent ATPase 1.
    
 0.760
DHX15
DEAH-box helicase 15.
    
 0.760
DHX9
DExH-box helicase 9.
    
 0.690
RBM25
RNA binding motif protein 25.
   
 
 0.594
DHX30
DExH-box helicase 30.
   
 0.593
SF1
Splicing factor 1.
    
 0.590
ENSMMMP00000022855
annotation not available
    
 0.590
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.