Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMMP00000003147annotation not available (332 aa)    
Predicted Functional Partners:
CD74
CD74 molecule.
   
 0.975
CTSH
Cathepsin H.
   
 0.973
CTSK
Cathepsin K.
   
 0.968
CTSS
Cathepsin S.
   
  0.952
ENSMMMP00000005431
annotation not available
   
 0.937
CST6
Cystatin E/M.
    
 0.930
CTSB
Cathepsin B.
   
 0.928
NAPSA
Napsin A aspartic peptidase.
   
 0.904
CTSZ
Cathepsin Z.
   
 0.904
CTSO
Cathepsin O.
  
 
0.891
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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