Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GJC1Gap junction protein gamma 1. (396 aa)    
Predicted Functional Partners:
GJD2
Gap junction protein delta 2.
  
  
 
0.802
GJA4
Gap junction protein alpha 4.
    
 
0.759
ENSMMMP00000018171
annotation not available
    
 
0.759
ENSMMMP00000018176
annotation not available
    
 
0.759
ENSMMMP00000020980
annotation not available
    
 
0.759
GJA5
Gap junction protein alpha 5.
  
  
0.733
GJC2
Gap junction protein gamma 2.
  
  
 
0.717
GJB6
Gap junction protein beta 6.
     
0.715
GJA8
Gap junction protein alpha 8.
     
 
0.694
GJB5
Gap junction protein beta 5.
     
0.660
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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