Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMMP00000003237annotation not available (131 aa)    
Predicted Functional Partners:
SYTL3
Synaptotagmin like 3.
      
 0.790
TMEM223
Transmembrane protein 223.
      
 0.636
TMEM38A
Transmembrane protein 38A.
      
 0.631
PRR16
Proline rich 16.
      
 0.630
LOC107147644
Developmental pluripotency-associated protein 2-like.
      
 0.547
ENSMMMP00000016352
annotation not available
      
 0.547
ENSMMMP00000025177
annotation not available
      
 0.521
ENSMMMP00000025191
annotation not available
      
 0.521
TMEM53
Transmembrane protein 53.
      
 0.501
TMEM9
Transmembrane protein 9.
      
 0.493
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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