STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLHDC1Kelch domain containing 1. (406 aa)    
Predicted Functional Partners:
RBX1
Ring-box 1.
    
 0.943
CUL5
Cullin 5.
    
 0.942
ASB4
Ankyrin repeat and SOCS box containing 4.
    
  0.928
ANKRD9
Ankyrin repeat domain 9.
    
  0.927
ARIH2
Ariadne RBR E3 ubiquitin protein ligase 2.
     
 0.919
ARIH1
Ariadne RBR E3 ubiquitin protein ligase 1.
    
  0.878
ENSMMMP00000013770
annotation not available
    
 0.868
RNF7
Ring finger protein 7.
    
 0.868
ENSMMMP00000019841
annotation not available
    
 0.868
APPBP2
Amyloid beta precursor protein binding protein 2.
     
 0.864
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.