STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGAP42Rho GTPase activating protein 42. (840 aa)    
Predicted Functional Partners:
ENSMMMP00000014363
annotation not available
    
 0.589
ENSMMMP00000021692
annotation not available
    
 0.589
GFOD1
Glucose-fructose oxidoreductase domain containing 1.
      
 0.569
NEPRO
Nucleolus and neural progenitor protein.
      
 0.564
MAIP1
Matrix AAA peptidase interacting protein 1.
      
 0.564
ENSMMMP00000000489
annotation not available
    
 0.539
ENSMMMP00000005605
annotation not available
    
 0.539
ENSMMMP00000006593
annotation not available
    
 0.539
ENSMMMP00000013788
annotation not available
    
 0.539
ENSMMMP00000020695
annotation not available
    
 0.539
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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