Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COPB1Coatomer protein complex subunit beta 1. (953 aa)    
Predicted Functional Partners:
ENSMMMP00000008925
annotation not available
   
 0.999
COPB2
Coatomer protein complex subunit beta 2.
   
 0.999
COPA
Coatomer protein complex subunit alpha.
   
 0.999
ARCN1
Archain 1.
   
 0.999
COPE
Coatomer protein complex subunit epsilon.
   
 0.998
COPZ1
Coatomer protein complex subunit zeta 1.
   
 0.997
COPG2
Coatomer protein complex subunit gamma 2.
   
 0.997
COPG1
Coatomer protein complex subunit gamma 1.
   
 0.997
COPZ2
Coatomer protein complex subunit zeta 2.
   
 0.996
TSGA13
Testis specific 13.
   
 0.992
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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