Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCP2D1SCP2 sterol binding domain containing 1. (156 aa)    
Predicted Functional Partners:
EHD3
EH domain containing 3.
    
   0.871
ECI2
enoyl-CoA delta isomerase 2.
  
 0.868
SCP2
Sterol carrier protein 2.
   
 0.818
HADHB
hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta.
  
 0.818
ACOX1
acyl-CoA oxidase 1.
  
 0.806
ACOX2
acyl-CoA oxidase 2.
  
 0.806
EHD1
EH domain containing 1.
    
   0.798
CS
Citrate synthase.
  
 0.764
CAT
Catalase.
   
 0.760
ACOT8
acyl-CoA thioesterase 8.
  
 
 0.739
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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