STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRBProtein tyrosine phosphatase receptor type B. (2216 aa)    
Predicted Functional Partners:
MST1R
Macrophage stimulating 1 receptor.
    
 0.872
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.872
CTNNB1
Catenin beta 1.
    
 0.857
TNC
Tenascin C.
    
0.821
TNR
Tenascin R.
    
 
0.821
TNN
Tenascin N.
    
 
0.821
CDH5
Cadherin 5.
   
 
 0.791
ADGRF5
Adhesion G protein-coupled receptor F5.
   
 
 0.777
TEK
TEK receptor tyrosine kinase.
   
 0.740
PTN
Pleiotrophin.
   
 0.740
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.