Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107145730Lysine-specific demethylase 4D-like. (514 aa)    
Predicted Functional Partners:
KDM1A
Lysine demethylase 1A.
   
 0.654
NOL7
Nucleolar protein 7.
    
   0.587
AR
Androgen receptor.
    
 0.574
ENSMMMP00000011570
annotation not available
    
 0.571
H3-3A
H3.3 histone A.
    
 0.571
KDM1B
Lysine demethylase 1B.
   
 0.554
ENSMMMP00000001963
annotation not available
    
 0.551
ENSMMMP00000001979
annotation not available
    
 0.551
ENSMMMP00000002095
annotation not available
    
 0.551
ENSMMMP00000002810
annotation not available
    
 0.551
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.