Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DROSHADrosha ribonuclease III. (1316 aa)    
Predicted Functional Partners:
DGCR8
DGCR8 microprocessor complex subunit.
    
 0.999
DDX5
DEAD-box helicase 5.
  
 0.998
DDX17
DEAD-box helicase 17.
  
 0.995
DDX21
DExD-box helicase 21.
  
 0.952
DDX50
DExD-box helicase 50.
  
 0.952
AGO2
Argonaute RISC catalytic component 2.
    
 0.951
SRPK1
SRSF protein kinase 1.
    
   0.949
TARBP2
TARBP2 subunit of RISC loading complex.
    
 0.947
ENSMMMP00000015764
annotation not available
     
 0.942
ENSMMMP00000006455
annotation not available
     
  0.937
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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