STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB29RAB29, member RAS oncogene family. (204 aa)    
Predicted Functional Partners:
GAK
Cyclin G associated kinase.
    
 
 0.773
ENSMMMP00000009749
annotation not available
    
 
 0.773
CHM
CHM Rab escort protein.
    
 0.768
ENSMMMP00000000446
annotation not available
    
 0.724
ENSMMMP00000013328
annotation not available
    
 0.724
PTAR1
Protein prenyltransferase alpha subunit repeat containing 1.
    
 0.661
HPS1
HPS1 biogenesis of lysosomal organelles complex 3 subunit 1.
     
 0.640
DNAJC6
DnaJ heat shock protein family (Hsp40) member C6.
    
 
 0.631
NUCKS1
Nuclear casein kinase and cyclin dependent kinase substrate 1.
 
    
 0.630
GDI1
GDP dissociation inhibitor 1.
    
 0.605
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.